Transcript: lnc-KIAA0141-1:1

Basic information

LNCipedia transcript ID: lnc-KIAA0141-1:1 
LNCipedia gene ID: lnc-KIAA0141-1
Location (hg38): chr5:141847578-141852238
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3692 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000501052; TCONS_00009526; NONHSAT104278
Alternative gene names: ENSG00000246581; XLOC_004581; linc-KIAA0141; AC005753.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.6534 non-coding 
CPAT coding probability 5.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIAA0141-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA0141-1:1
3.1 lnc-KIAA0141-1:1
4.0 lnc-KIAA0141-1:1
4.1 lnc-KIAA0141-1:1
5.0 lnc-KIAA0141-1:1
5.1 lnc-PCDHGA7-6:1
5.2 lnc-KIAA0141-1:1