Transcript: lnc-KHDRBS2-1:1

Basic information

LNCipedia transcript ID: lnc-KHDRBS2-1:1 
LNCipedia gene ID: lnc-KHDRBS2-1
Location (hg38): chr6:61630233-61681049
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 675 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000511849.1; RP1-240B8.3-001; OTTHUMT00000041065.1; NONHSAT113328
Alternative gene names: ENSG00000250686.1; RP1-240B8.3; OTTHUMG00000014935.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.1274 non-coding 
CPAT coding probability 5.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KHDRBS2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KHDRBS2-1:1
4.0 lnc-KHDRBS2-1:1
4.1 lnc-KHDRBS2-1:1
5.0 lnc-KHDRBS2-1:1
5.1 lnc-GSTA5-60:1
5.2 lnc-KHDRBS2-1:1