Transcript: lnc-KCNN2-2:5

Basic information

LNCipedia transcript ID: lnc-KCNN2-2:5 
LNCipedia gene ID: lnc-KCNN2-2
Location (hg38): chr5:114055978-114361042
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 779 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251628.1|FTMT21900021129.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -106.1304 non-coding 
CPAT coding probability 3.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNN2-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KCNN2-2:5
5.0 lnc-KCNN2-2:5
5.1 lnc-AP3S1-32:2
5.2 lnc-KCNN2-2:5