Transcript: lnc-KCNK7-1:1

Basic information

LNCipedia transcript ID: lnc-KCNK7-1:1 
LNCipedia gene ID: lnc-KCNK7-1
Location (hg38): chr11:65582806-65590372
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2879 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_498_chr11:65350276-65357843_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 220.5311 coding 
CPAT coding probability 61.76% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KCNK7-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNK7-1:1
4.0 lnc-KCNK7-1:1
4.1 lnc-KCNK7-1:1
5.0 lnc-KCNK7-1:1
5.1 lnc-LTBP3-1:5
5.2 lnc-KCNK7-1:1