Transcript: lnc-JUN-5:3

Basic information

LNCipedia transcript ID: lnc-JUN-5:3 
LNCipedia gene ID: lnc-JUN-5
Location (hg38): chr1:59131938-59146807
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1041 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00000017
Alternative gene names: XLOC_000851; linc-JUN-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.2956 non-coding 
CPAT coding probability 3.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JUN-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-JUN-5:3
3.1 lnc-JUN-5:3
4.0 lnc-JUN-5:3
4.1 lnc-JUN-5:3
5.0 lnc-JUN-5:3
5.1 lnc-C8B-34:18
5.2 lnc-JUN-5:3