Transcript: lnc-JRKL-2:2

Basic information

LNCipedia transcript ID: lnc-JRKL-2:2 
LNCipedia gene ID: lnc-JRKL-2
Location (hg38): chr11:96659591-96660901
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 270 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019449; NONHSAT023816
Alternative gene names: XLOC_009258; linc-CNTN5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.3247 non-coding 
CPAT coding probability 4.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JRKL-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-JRKL-2:2
3.1 lnc-JRKL-2:2
4.0 lnc-JRKL-2:2
4.1 lnc-JRKL-2:2
5.0 lnc-JRKL-2:2
5.1 lnc-DYNC2H1-36:4
5.2 lnc-JRKL-2:2