Transcript: lnc-JRK-1:3

Basic information

LNCipedia transcript ID: lnc-JRK-1:3 
LNCipedia gene ID: lnc-JRK-1
Location (hg38): chr8:142679974-142681968
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1175 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT129473; ENST00000585503.1
Alternative gene names: ENSG00000234616.4; JRK


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.8923 non-coding 
CPAT coding probability 26.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JRK-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARC-1:7
4.0 lnc-ARC-1:7
4.1 lnc-ARC-1:7
5.0 lnc-ARC-1:7
5.1 lnc-SLURP2-3:3
5.2 lnc-JRK-1:3