Transcript: lnc-JMJD7-PLA2G4B-11:3

Basic information

LNCipedia transcript ID: lnc-JMJD7-PLA2G4B-11:3 
LNCipedia gene ID: lnc-JMJD7-PLA2G4B-11
Location (hg38): chr15:41972791-41981304
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3199 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000246740.2|MICT00000115180.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.6798 non-coding 
CPAT coding probability 4.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JMJD7-PLA2G4B-11:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PLA2G4E-AS1:6
5.0 PLA2G4E-AS1:6
5.1 lnc-TMEM62-152:3
5.2 lnc-JMJD7-PLA2G4B-11:3