Transcript: lnc-JMJD4-4:4

Basic information

LNCipedia transcript ID: lnc-JMJD4-4:4 
LNCipedia gene ID: lnc-JMJD4-4
Location (hg38): chr1:227539757-227542676
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2920 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000096755.1|FTMT20200012476.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 90.1866 coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-JMJD4-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-JMJD4-4:4
5.0 lnc-JMJD4-4:4
5.1 lnc-JMJD4-4:4
5.2 lnc-JMJD4-4:4