Transcript: lnc-JAM3-8:1

Basic information

LNCipedia transcript ID: lnc-JAM3-8:1 
LNCipedia gene ID: lnc-JAM3-8
Location (hg38): chr11:133537482-133546551
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2299 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_572_NR_027276
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.4612 non-coding 
CPAT coding probability 89.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-JAM3-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-JAM3-8:1
4.0 lnc-JAM3-8:1
4.1 lnc-JAM3-8:1
5.0 lnc-JAM3-8:1
5.1 lnc-JAM3-8:1
5.2 lnc-JAM3-8:1