Transcript: lnc-JADE1-2:1

Basic information

LNCipedia transcript ID: lnc-JADE1-2:1 
LNCipedia gene ID: lnc-JADE1-2
Location (hg38): chr4:128735193-128738914
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 965 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2730_chr4:129656347-129659963_placenta
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.1856 non-coding 
CPAT coding probability 3.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JADE1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PHF17-2:1
4.0 lnc-PHF17-2:1
4.1 lnc-PHF17-2:1
5.0 lnc-PHF17-2:1
5.1 lnc-ABHD18-10:1
5.2 lnc-JADE1-2:1