Transcript: lnc-IZUMO4-1:1

Basic information

LNCipedia transcript ID: lnc-IZUMO4-1:1 
LNCipedia gene ID: lnc-IZUMO4-1
Location (hg38): chr19:2068377-2070304
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 602 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT060398; FPKM1_group_14320_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.7413 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IZUMO4-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IZUMO4-1:1
4.0 lnc-IZUMO4-1:1
4.1 lnc-IZUMO4-1:1
5.0 lnc-IZUMO4-1:1
5.1 lnc-RPL36-105:1
5.2 lnc-IZUMO4-1:1