Transcript: lnc-ITPRIP-6:1

Basic information

LNCipedia transcript ID: lnc-ITPRIP-6:1 
LNCipedia gene ID: lnc-ITPRIP-6
Location (hg38): chr10:104654601-104656190
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1275 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001kyj_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.3991 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITPRIP-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITPRIP-6:1
4.0 lnc-ITPRIP-6:1
4.1 lnc-ITPRIP-6:1
5.0 lnc-ITPRIP-6:1
5.1 lnc-CPN1-114:1
5.2 lnc-ITPRIP-6:1