Transcript: lnc-ITPRIP-2:3

Basic information

LNCipedia transcript ID: lnc-ITPRIP-2:3 
LNCipedia gene ID: lnc-ITPRIP-2
RefSeq ID: NR_120624
Location (hg38): chr10:104474939-104480275
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1014 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120624.1
Alternative gene names: LOC101927523


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.7991 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITPRIP-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CPN1-113:2
5.1 lnc-CPN1-113:2
5.2 lnc-ITPRIP-2:3