Transcript: lnc-ITIH2-3:1

Basic information

LNCipedia transcript ID: lnc-ITIH2-3:1 
LNCipedia gene ID: lnc-ITIH2-3
Location (hg38): chr10:7485385-7492696
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1414 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000535221; NONHSAT011284
Alternative gene names: ENSG00000256497; AL139125.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.2786 non-coding 
CPAT coding probability 2.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITIH2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ITIH2-3:1
3.1 lnc-ITIH2-3:1
4.0 lnc-ITIH2-3:1
4.1 lnc-ITIH2-3:1
5.0 lnc-ITIH2-3:1
5.1 lnc-NPY4R2-437:1
5.2 lnc-ITIH2-3:1