Transcript: lnc-ITGB8-2:4

Basic information

LNCipedia transcript ID: lnc-ITGB8-2:4 
LNCipedia gene ID: lnc-ITGB8-2
Location (hg38): chr7:20217367-20221693
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 960 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT119412
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -124.4862 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITGB8-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB8-2:4
4.0 lnc-ITGB8-2:4
4.1 lnc-ITGB8-2:4
5.0 lnc-ITGB8-2:4
5.1 lnc-AHR-34:1
5.2 lnc-ITGB8-2:4