Transcript: lnc-ITGA2B-3:1

Basic information

LNCipedia transcript ID: lnc-ITGA2B-3:1 
LNCipedia gene ID: lnc-ITGA2B-3
Ensembl Gene ID: ENSG00000283045
Ensembl Transcript ID: ENST00000634783
Location (hg38): chr17:44486153-44486815
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 663 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634783.1
Alternative gene names: ENSG00000283045.1; RP11-764D10.2; AC103703.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.4979 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITGA2B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ITGA2B-3:1
4.1 lnc-ITGA2B-3:1
5.0 lnc-ITGA2B-3:1
5.1 lnc-GFAP-23:1
5.2 lnc-ITGA2B-3:1