Transcript: lnc-ISY1-1:1

Basic information

LNCipedia transcript ID: lnc-ISY1-1:1 
LNCipedia gene ID: lnc-ISY1-1
Ensembl Gene ID: ENSG00000273437
Ensembl Transcript ID: ENST00000609183
Location (hg38): chr3:129163606-129163940
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 335 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609183.1
Alternative gene names: ENSG00000273437.1; RP11-434H6.7; AC108673.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.9461 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ISY1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ISY1-1:1
4.0 lnc-ISY1-1:1
4.1 lnc-ISY1-1:1
5.0 lnc-ISY1-1:1
5.1 lnc-ISY1-1:1
5.2 lnc-ISY1-1:1