Transcript: lnc-IRS1-2:11

Basic information

LNCipedia transcript ID: lnc-IRS1-2:11 
LNCipedia gene ID: lnc-IRS1-2
Location (hg38): chr2:225885653-225891547
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 214 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004598; NONHSAT077180
Alternative gene names: XLOC_002503; linc-DOCK10-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -276.7191 non-coding 
CPAT coding probability 3.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRS1-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DOCK10-1:1
3.1 lnc-DOCK10-1:1
4.0 lnc-DOCK10-1:1
4.1 lnc-IRS1-2:11
5.0 lnc-IRS1-2:11
5.1 lnc-WDFY1-17:11
5.2 lnc-IRS1-2:11