Transcript: lnc-IRF8-8:2

Basic information

LNCipedia transcript ID: lnc-IRF8-8:2 
LNCipedia gene ID: lnc-IRF8-8
Location (hg38): chr16:85853904-85880768
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1995 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028173.1|MICT00000137508.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.7853 non-coding 
CPAT coding probability 4.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRF8-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IRF8-8:2
5.0 lnc-IRF8-8:2
5.1 lnc-COX4I1-8:2
5.2 lnc-IRF8-8:2