Transcript: lnc-IRF8-1:6

Basic information

LNCipedia transcript ID: lnc-IRF8-1:6 
LNCipedia gene ID: lnc-IRF8-1
Ensembl Gene ID: ENSG00000285163
Ensembl Transcript ID: ENST00000646986
Location (hg38): chr16:85935297-85948824
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1532 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646986.1
Alternative gene names: ENSG00000285163.1; AC092723.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.4118 non-coding 
CPAT coding probability 47.40% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IRF8-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-COX4I1-6:5
5.1 lnc-COX4I1-6:5
5.2 lnc-IRF8-1:6