Transcript: lnc-IRF2BPL-6:1

Basic information

LNCipedia transcript ID: lnc-IRF2BPL-6:1 
LNCipedia gene ID: lnc-IRF2BPL-6
Location (hg38): chr14:76955204-76956434
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1231 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000021639.1|ENCT00000135916.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -76.8466 non-coding 
CPAT coding probability 5.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRF2BPL-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IRF2BPL-6:1
5.0 lnc-IRF2BPL-6:1
5.1 lnc-PROX2-35:1
5.2 lnc-IRF2BPL-6:1