Transcript: lnc-IRF2BP2-2:10

Basic information

LNCipedia transcript ID: lnc-IRF2BP2-2:10 
LNCipedia gene ID: lnc-IRF2BP2-2
Location (hg38): chr1:234716705-234719442
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 257 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00002622; NONHSAT010309
Alternative gene names: XLOC_001264; linc-IRF2BP2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRF2BP2-2:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IRF2BP2-3:1
3.1 lnc-IRF2BP2-3:1
4.0 lnc-IRF2BP2-3:1
4.1 lnc-IRF2BP2-2:10
5.0 lnc-IRF2BP2-2:10
5.1 lnc-SIPA1L2-34:6
5.2 lnc-IRF2BP2-2:10