Transcript: lnc-INSL5-3:2

Basic information

LNCipedia transcript ID: lnc-INSL5-3:2 
LNCipedia gene ID: lnc-INSL5-3
Location (hg38): chr1:66470220-66564364
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7086 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000061441.1|MICT00000012646.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.4593 non-coding 
CPAT coding probability 18.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INSL5-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AL139147.1-3:2
5.0 lnc-AL139147.1-3:2
5.1 lnc-SLC35D1-6:2
5.2 lnc-INSL5-3:2