Transcript: lnc-INSL5-2:1

Basic information

LNCipedia transcript ID: lnc-INSL5-2:1 
LNCipedia gene ID: lnc-INSL5-2
Ensembl Gene ID: ENSG00000248458
Ensembl Transcript ID: ENST00000502413
Location (hg38): chr1:66665864-66677027
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1156 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000502413.2
Alternative gene names: ENSG00000248458.2; RP4-598P13.1; AL139147.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.9942 non-coding 
CPAT coding probability 75.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-INSL5-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AL139147.1-2:1
4.1 lnc-AL139147.1-2:1
5.0 lnc-AL139147.1-2:1
5.1 lnc-SLC35D1-4:1
5.2 lnc-INSL5-2:1