Transcript: lnc-INO80D-8:1

Basic information

LNCipedia transcript ID: lnc-INO80D-8:1 
LNCipedia gene ID: lnc-INO80D-8
Location (hg38): chr2:205679677-205682355
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2679 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000051324.1|ENCT00000252640.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -79.176 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INO80D-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-INO80D-8:1
5.0 lnc-INO80D-8:1
5.1 lnc-HSPD1-96:1
5.2 lnc-INO80D-8:1