Transcript: lnc-INAVA-1:5

Basic information

LNCipedia transcript ID: lnc-INAVA-1:5 
LNCipedia gene ID: lnc-INAVA-1
Location (hg38): chr1:201023949-201027521
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2155 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229191.1|FTMT20300062487.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -107.0528 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INAVA-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1orf106-1:9
5.0 lnc-C1orf106-1:9
5.1 lnc-ADORA1-63:5
5.2 lnc-INAVA-1:5