Transcript: lnc-IL32-1:1

Basic information

LNCipedia transcript ID: lnc-IL32-1:1 
LNCipedia gene ID: lnc-IL32-1
Location (hg38): chr16:3054342-3055380
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 939 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000570995.1; RP11-473M20.8-001; OTTHUMT00000437120.1; NONHSAT147938
Alternative gene names: ENSG00000262019.1; RP11-473M20.8; OTTHUMG00000177476.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.6967 non-coding 
CPAT coding probability 10.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL32-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL32-1:1
4.0 lnc-IL32-1:1
4.1 lnc-IL32-1:1
5.0 lnc-IL32-1:1
5.1 lnc-THOC6-4:3
5.2 lnc-IL32-1:1