Transcript: lnc-IL17REL-5:1

Basic information

LNCipedia transcript ID: lnc-IL17REL-5:1 
LNCipedia gene ID: lnc-IL17REL-5
Location (hg38): chr22:49957711-49960306
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2596 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058903.1|ENCT00000283873.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.7517 non-coding 
CPAT coding probability 17.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17REL-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALG12-5:1
5.0 lnc-ALG12-5:1
5.1 lnc-BRD1-11:1
5.2 lnc-IL17REL-5:1