Transcript: lnc-IL17RC-2:1

Basic information

LNCipedia transcript ID: lnc-IL17RC-2:1 
LNCipedia gene ID: lnc-IL17RC-2
Ensembl Gene ID: ENSG00000269894
Ensembl Transcript ID: ENST00000602411
Location (hg38): chr3:9935706-9936258
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 553 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT087846; ENST00000602411.1
Alternative gene names: ENSG00000269894.1; RP11-1020A11.1; AC018809.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.9837 non-coding 
CPAT coding probability 1.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17RC-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17RC-2:1
4.0 lnc-IL17RC-2:1
4.1 lnc-IL17RC-2:1
5.0 lnc-IL17RC-2:1
5.1 lnc-BRK1-5:1
5.2 lnc-IL17RC-2:1