Transcript: lnc-IL15RA-1:1

Basic information

LNCipedia transcript ID: lnc-IL15RA-1:1 
LNCipedia gene ID: lnc-IL15RA-1
Location (hg38): chr10:5937116-5945900
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 640 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000397264.3; RP11-536K7.3-002; OTTHUMT00000046613.1; NONHSAT011194
Alternative gene names: ENSG00000232807.1; RP11-536K7.3; OTTHUMG00000017611.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 222.8912 coding 
CPAT coding probability 8.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IL15RA-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL15RA-1:1
4.0 lnc-IL15RA-1:1
4.1 lnc-IL15RA-1:1
5.0 lnc-IL15RA-1:1
5.1 lnc-KLF6-66:7
5.2 lnc-IL15RA-1:1