Transcript: lnc-IKBIP-16:2

Basic information

LNCipedia transcript ID: lnc-IKBIP-16:2 
LNCipedia gene ID: lnc-IKBIP-16
Location (hg38): chr12:97730048-97756517
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2945 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000550548; NONHSAT030111; NR_077240
Alternative gene names: ENSG00000257501; RP11-1016B18.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.8563 non-coding 
CPAT coding probability 24.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IKBIP-16:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-181C3.1.1-4:2
3.1 lnc-RP11-181C3.1.1-4:2
4.0 lnc-RP11-181C3.1.1-4:2
4.1 lnc-RP11-181C3.1.1-4:2
5.0 lnc-RP11-181C3.1.1-4:2
5.1 lnc-ANKS1B-21:2
5.2 lnc-IKBIP-16:2