Transcript: lnc-IGSF11-5:2

Basic information

LNCipedia transcript ID: lnc-IGSF11-5:2 
LNCipedia gene ID: lnc-IGSF11-5
RefSeq ID: NR_135547
Location (hg38): chr3:118508411-118810833
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 595 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135547.1
Alternative gene names: LOC105374060


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -52.3063 non-coding 
CPAT coding probability 12.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGSF11-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GOLGB1-36:1
5.1 lnc-GOLGB1-36:1
5.2 lnc-IGSF11-5:2