Transcript: lnc-IGIP-4:1

Basic information

LNCipedia transcript ID: lnc-IGIP-4:1 
LNCipedia gene ID: lnc-IGIP-4
Location (hg38): chr5:140143952-140154418
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6069 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_3029_chr5:139523536-139534003_adrenal
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.1511 non-coding 
CPAT coding probability 97.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IGIP-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IGIP-1:2
4.0 lnc-IGIP-1:2
4.1 lnc-IGIP-1:2
5.0 lnc-IGIP-1:2
5.1 lnc-EIF4EBP3-18:1
5.2 lnc-IGIP-4:1