Transcript: lnc-IGFBP3-5:4

Basic information

LNCipedia transcript ID: lnc-IGFBP3-5:4 
LNCipedia gene ID: lnc-IGFBP3-5
Location (hg38): chr7:45573618-45574318
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 701 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000095815.1|FTMT22600002846.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -117.8464 non-coding 
CPAT coding probability 18.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFBP3-5:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IGFBP3-5:4
5.0 lnc-IGFBP3-5:4
5.1 lnc-TNS3-20:4
5.2 lnc-IGFBP3-5:4