Transcript: lnc-IFT74-1:3

Basic information

LNCipedia transcript ID: lnc-IFT74-1:3 
LNCipedia gene ID: lnc-IFT74-1
Ensembl Gene ID: ENSG00000254261
Ensembl Transcript ID: ENST00000523363
Location (hg38): chr9:26746953-26786874
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 443 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523363; ENST00000523363.1; RP11-18A15.1-001; OTTHUMT00000378353.1; NONHSAT130594
Alternative gene names: ENSG00000254261; RP11-18A15.1; ENSG00000254261.1; OTTHUMG00000164347.1; AL451137.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.6285 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFT74-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IFT74-2:1
3.1 lnc-IFT74-2:1
4.0 lnc-IFT74-2:1
4.1 lnc-IFT74-1:3
5.0 lnc-IFT74-1:3
5.1 lnc-RECK-105:1
5.2 lnc-IFT74-1:3