Transcript: lnc-IFT140-2:1

Basic information

LNCipedia transcript ID: lnc-IFT140-2:1 
LNCipedia gene ID: lnc-IFT140-2
Location (hg38): chr16:1672897-1677906
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3214 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000500567
Alternative gene names: ENSG00000245096


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 75.5087 coding 
CPAT coding probability 15.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IFT140-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IFT140-1:1
3.1 lnc-IFT140-2:1
4.0 lnc-IFT140-2:1
4.1 lnc-IFT140-2:1
5.0 lnc-IFT140-2:1
5.1 lnc-PKMYT1-81:1
5.2 lnc-IFT140-2:1