Transcript: lnc-IFIT5-4:1

Basic information

LNCipedia transcript ID: lnc-IFIT5-4:1 
LNCipedia gene ID: lnc-IFIT5-4
Location (hg38): chr10:89430939-89456108
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1315 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT015512
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.3476 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFIT5-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IFIT5-1:3
4.0 SLC16A12-AS1:1
4.1 SLC16A12-AS1:1
5.0 SLC16A12-AS1:1
5.1 lnc-SMC3-344:1
5.2 lnc-IFIT5-4:1