Transcript: lnc-IFIT2-1:13

Basic information

LNCipedia transcript ID: lnc-IFIT2-1:13 
LNCipedia gene ID: lnc-IFIT2-1
Location (hg38): chr10:89283846-89292761
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3136 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232110.3|HBMT00000149775.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.0578 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFIT2-1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IFIT2-1:13
5.0 lnc-IFIT2-1:13
5.1 lnc-SMC3-284:12
5.2 lnc-IFIT2-1:13