Transcript: lnc-IER2-1:1

Basic information

LNCipedia transcript ID: lnc-IER2-1:1 
LNCipedia gene ID: lnc-IER2-1
Ensembl Gene ID: ENSG00000266897
Ensembl Transcript ID: ENST00000591837
Location (hg38): chr19:13131571-13132410
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 391 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT061334; ENST00000591837.1
Alternative gene names: ENSG00000266897.1; AC005546.2; AC005546.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -165.0317 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IER2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IER2-1:1
4.0 lnc-IER2-1:1
4.1 lnc-IER2-1:1
5.0 lnc-IER2-1:1
5.1 lnc-ZNF763-33:1
5.2 lnc-IER2-1:1