Transcript: lnc-IDNK-1:3

Basic information

LNCipedia transcript ID: lnc-IDNK-1:3 
LNCipedia gene ID: lnc-IDNK-1
Location (hg38): chr9:83708315-83713378
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1020 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254473.1|ENST00000531661.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.7235 non-coding 
CPAT coding probability 80.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IDNK-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C9orf103-1:4
5.0 lnc-C9orf103-1:4
5.1 lnc-SECISBP2-81:4
5.2 lnc-IDNK-1:3