Transcript: lnc-ICOSLG-1:6

Basic information

LNCipedia transcript ID: lnc-ICOSLG-1:6 
LNCipedia gene ID: lnc-ICOSLG-1
Ensembl Gene ID: ENSG00000232124
Ensembl Transcript ID: ENST00000423967
Location (hg38): chr21:44200913-44207399
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 697 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000423967.2
Alternative gene names: ENSG00000232124.2; AP001057.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.9682 non-coding 
CPAT coding probability 12.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ICOSLG-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-POFUT2-28:2
5.1 lnc-POFUT2-28:2
5.2 lnc-ICOSLG-1:6