Transcript: lnc-ICE1-4:1

Basic information

LNCipedia transcript ID: lnc-ICE1-4:1 
LNCipedia gene ID: lnc-ICE1-4
Location (hg38): chr5:5741398-5747505
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1050 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_2860_chr5:5741510-5747618_heart
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.725 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ICE1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA0947-4:1
4.0 lnc-KIAA0947-4:1
4.1 lnc-KIAA0947-4:1
5.0 lnc-KIAA0947-4:1
5.1 lnc-CARD6-333:1
5.2 lnc-ICE1-4:1