Transcript: lnc-HSPB8-2:2

Basic information

LNCipedia transcript ID: lnc-HSPB8-2:2 
LNCipedia gene ID: lnc-HSPB8-2
Ensembl Gene ID: ENSG00000256031
Ensembl Transcript ID: ENST00000641910
Location (hg38): chr12:118989727-119001840
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 848 bp
Exons: 5
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641910.1
Alternative gene names: ENSG00000256031.2; AC087885.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -34.6471 non-coding 
CPAT coding probability 1.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPB8-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SIRT4-26:1
5.1 lnc-SIRT4-26:1
5.2 lnc-HSPB8-2:2