Transcript: lnc-HSPA12A-1:6

Basic information

LNCipedia transcript ID: lnc-HSPA12A-1:6 
LNCipedia gene ID: lnc-HSPA12A-1
Location (hg38): chr10:116813564-116849720
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 20044 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225302.1|ENCT00000060713.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 20.0573 non-coding 
CPAT coding probability 3.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPA12A-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIAA1598-1:10
5.0 lnc-KIAA1598-1:10
5.1 lnc-NSMCE4A-89:5
5.2 lnc-HSPA12A-1:6