Transcript: lnc-HSP90AA1-15:3

Basic information

LNCipedia transcript ID: lnc-HSP90AA1-15:3 
LNCipedia gene ID: lnc-HSP90AA1-15
Location (hg38): chr14:101796555-101810321
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 448 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259088.1|ENST00000554859.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -85.5394 non-coding 
CPAT coding probability 2.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSP90AA1-15:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HSP90AA1-15:3
5.0 lnc-HSP90AA1-15:3
5.1 lnc-HSP90AA1-15:3
5.2 lnc-HSP90AA1-15:3