Transcript: lnc-HSFY1-2:4

Basic information

LNCipedia transcript ID: lnc-HSFY1-2:4 
LNCipedia gene ID: lnc-HSFY1-2
Location (hg38): chrY:19567313-19590247
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1000 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT139620
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 75.0948 coding 
CPAT coding probability 32.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HSFY1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYorf15A.1-2:1
4.0 lnc-CYorf15A.1-2:1
4.1 lnc-CYorf15A.1-2:1
5.0 lnc-CYorf15A.1-2:1
5.1 lnc-PRY-60:1
5.2 lnc-HSFY1-2:4