Transcript: lnc-HRCT1-5:4

Basic information

LNCipedia transcript ID: lnc-HRCT1-5:4 
LNCipedia gene ID: lnc-HRCT1-5
Location (hg38): chr9:35913975-35914410
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 325 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015969; NONHSAT130997
Alternative gene names: XLOC_007341; linc-RECK-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.393 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HRCT1-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HRCT1-2:2
3.1 lnc-HRCT1-2:2
4.0 lnc-HRCT1-2:2
4.1 LINC00961:11
5.0 LINC00961:11
5.1 lnc-RECK-323:4
5.2 lnc-HRCT1-5:4