Transcript: lnc-HRCT1-5:1

Basic information

LNCipedia transcript ID: lnc-HRCT1-5:1 
LNCipedia gene ID: lnc-HRCT1-5
Location (hg38): chr9:35912942-35914527
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1361 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT130993
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.5177 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HRCT1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HRCT1-2:3
4.0 lnc-HRCT1-2:3
4.1 LINC00961:8
5.0 LINC00961:8
5.1 lnc-RECK-323:1
5.2 lnc-HRCT1-5:1