Transcript: lnc-HPRT1-8:3

Basic information

LNCipedia transcript ID: lnc-HPRT1-8:3 
LNCipedia gene ID: lnc-HPRT1-8
Location (hg38): chrX:134599429-134608162
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2743 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235813.1|MICT00000380389.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.8376 non-coding 
CPAT coding probability 34.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HPRT1-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HPRT1-8:3
5.0 lnc-HPRT1-8:3
5.1 lnc-TEX13C-128:2
5.2 lnc-HPRT1-8:3